Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_102229 | Not Available | Negative | 1146737 - 1147717 | 36339.3 |
| hypothetical protein | SAMN05444682_102230 | Not Available | Negative | 1147721 - 1148629 | 34444.8 |
| protein of unknown function | SAMN05444682_102231 | Not Available | Negative | 1148644 - 1149438 | 29440.7 |
| predicted dehydrogenase | SAMN05444682_102232 | Not Available | Negative | 1149468 - 1150622 | 43088.9 |
| xylose isomerase-like tim barrel | SAMN05444682_102233 | Not Available | Negative | 1150670 - 1151704 | 38091.9 |
| hypothetical protein | SAMN05444682_102234 | Not Available | Negative | 1151736 - 1152953 | 45276.7 |
| starch-binding associating with outer membrane | SAMN05444682_102235 | Not Available | Negative | 1153020 - 1154522 | 56242.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102236 | Not Available | Negative | 1154554 - 1157703 | 115009.0 |
| fucose permease | SAMN05444682_102237 | Not Available | Negative | 1157894 - 1159153 | 45011.0 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_102238 | Not Available | Positive | 1159573 - 1162758 | 119772.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
