Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_102219 | Not Available | Positive | 1135446 - 1135688 | 8989.0 |
| hypothetical protein | SAMN05444682_102220 | Not Available | Positive | 1135692 - 1136060 | 13825.1 |
| arylsulfatase a | SAMN05444682_102221 | Not Available | Negative | 1136035 - 1138122 | 77261.9 |
| arylsulfatase a | SAMN05444682_102222 | Not Available | Negative | 1138123 - 1139748 | 60017.6 |
| arylsulfatase a | SAMN05444682_102223 | Not Available | Negative | 1139756 - 1141180 | 52868.1 |
| acetyl esterase/lipase | SAMN05444682_102224 | Not Available | Negative | 1141195 - 1142049 | 31379.4 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN05444682_102225 | Not Available | Negative | 1142103 - 1143455 | 50899.0 |
| hypothetical protein | SAMN05444682_102226 | Not Available | Negative | 1143452 - 1144672 | 46652.6 |
| 3-dehydroquinate synthase | SAMN05444682_102227 | Not Available | Negative | 1144674 - 1145834 | 42345.9 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444682_102228 | Not Available | Negative | 1145843 - 1146700 | 29875.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
