Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_102209 | Not Available | Positive | 1121384 - 1121932 | 20635.3 |
| substrate-binding protein-like domain-containing protein | SAMN05444682_102210 | Not Available | Negative | 1121925 - 1122956 | 39351.7 |
| l-rhamnose mutarotase | SAMN05444682_102211 | Not Available | Negative | 1123004 - 1123300 | 11587.8 |
| alpha-l-rhamnosidase | SAMN05444682_102212 | Not Available | Negative | 1123329 - 1125047 | 63758.0 |
| alpha-l-rhamnosidase | SAMN05444682_102213 | Not Available | Negative | 1125110 - 1127401 | 86530.0 |
| starch-binding associating with outer membrane | SAMN05444682_102214 | Not Available | Negative | 1127438 - 1129165 | 64798.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102215 | Not Available | Negative | 1129185 - 1132346 | 116302.0 |
| sugar phosphate isomerase/epimerase | SAMN05444682_102216 | Not Available | Negative | 1132534 - 1133376 | 32806.7 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05444682_102217 | Not Available | Negative | 1133376 - 1134191 | 30763.3 |
| arac-like ligand binding domain-containing protein | SAMN05444682_102218 | Not Available | Positive | 1134474 - 1135349 | 33498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
