Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN05444682_10187 | Not Available | Positive | 107382 - 108779 | 53154.1 |
| hypothetical protein | SAMN05444682_10188 | Not Available | Negative | 108825 - 109265 | 15907.4 |
| hypothetical protein | SAMN05444682_10189 | Not Available | Positive | 109918 - 110118 | 7790.7 |
| hypothetical protein | SAMN05444682_10190 | Not Available | Positive | 110100 - 110489 | 14347.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_10191 | Not Available | Negative | 110497 - 111075 | 23125.1 |
| vitamin k-dependent gamma-carboxylase | SAMN05444682_10192 | Not Available | Negative | 111124 - 112041 | 34649.0 |
| hypothetical protein | SAMN05444682_10193 | Not Available | Negative | 112038 - 112613 | 21201.5 |
| hypothetical protein | SAMN05444682_10194 | Not Available | Negative | 112603 - 112836 | 8549.5 |
| two component transcriptional regulator, lyttr family | SAMN05444682_10195 | Not Available | Positive | 112868 - 113749 | 32955.4 |
| histidine kinase | SAMN05444682_10196 | Not Available | Positive | 113746 - 114867 | 42428.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
