Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proton-dependent oligopeptide transporter, pot family | SAMN03003324_00977 | Not Available | Positive | 1058820 - 1060355 | 56319.8 |
| dolichol-phosphate mannosyltransferase | SAMN03003324_00978 | Not Available | Positive | 1060544 - 1061272 | 27880.1 |
| bacteriocin-protection, ydei or ompd-associated | SAMN03003324_00979 | Not Available | Negative | 1061257 - 1061772 | 19527.2 |
| tigr02757 family protein | SAMN03003324_00980 | Not Available | Negative | 1061769 - 1062545 | 29748.8 |
| cystathionine gamma-lyase | SAMN03003324_00981 | Not Available | Negative | 1062552 - 1063691 | 42002.4 |
| prolyl-trna synthetase | SAMN03003324_00982 | Not Available | Negative | 1063723 - 1065195 | 55511.9 |
| hypothetical protein | SAMN03003324_00983 | Not Available | Positive | 1065302 - 1066282 | 34684.6 |
| long-chain fatty acid transport protein | SAMN03003324_00984 | Not Available | Positive | 1066298 - 1067854 | 57075.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN03003324_00985 | Not Available | Negative | 1067977 - 1069788 | 66845.3 |
| starvation-inducible dna-binding protein | SAMN03003324_00986 | Not Available | Negative | 1069933 - 1070412 | 18441.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

