Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN03003324_00967 | Not Available | Negative | 1047048 - 1048508 | 55197.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN03003324_00968 | Not Available | Negative | 1048634 - 1049086 | 17289.8 |
| glpgli family protein | SAMN03003324_00969 | Not Available | Positive | 1049296 - 1050189 | 33468.8 |
| hypothetical protein | SAMN03003324_00970 | Not Available | Positive | 1050189 - 1052834 | 100897.0 |
| predicted transcriptional regulator | SAMN03003324_00971 | Not Available | Positive | 1052880 - 1053275 | 14963.0 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN03003324_00972 | Not Available | Positive | 1053279 - 1054346 | 40856.7 |
| spfh domain / band 7 family protein | SAMN03003324_00973 | Not Available | Positive | 1054682 - 1055539 | 31295.3 |
| hypothetical protein | SAMN03003324_00974 | Not Available | Positive | 1055542 - 1055736 | 7405.91 |
| acetyl-coa c-acetyltransferase | SAMN03003324_00975 | Not Available | Positive | 1055777 - 1056952 | 40591.6 |
| proton-dependent oligopeptide transporter, pot family | SAMN03003324_00976 | Not Available | Positive | 1057099 - 1058760 | 61437.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

