Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN03003324_00957 | Not Available | Negative | 1038169 - 1039149 | 36927.4 |
| hypothetical protein | SAMN03003324_00958 | Not Available | Positive | 1039264 - 1039764 | 19114.5 |
| hypothetical protein | SAMN03003324_00959 | Not Available | Positive | 1039754 - 1040032 | 10413.5 |
| hypothetical protein | SAMN03003324_00960 | Not Available | Negative | 1040247 - 1040369 | 4622.94 |
| putative nadh-flavin reductase | SAMN03003324_00961 | Not Available | Positive | 1040556 - 1041197 | 23733.6 |
| dna-binding transcriptional regulator, marr family | SAMN03003324_00962 | Not Available | Negative | 1041231 - 1041701 | 17829.5 |
| membrane fusion protein, multidrug efflux system | SAMN03003324_00963 | Not Available | Positive | 1041838 - 1042887 | 37784.0 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN03003324_00964 | Not Available | Positive | 1042899 - 1044479 | 57600.2 |
| outer membrane protein tolc | SAMN03003324_00965 | Not Available | Positive | 1044495 - 1045784 | 47934.1 |
| 3-methyladenine dna glycosylase alkc | SAMN03003324_00966 | Not Available | Positive | 1045938 - 1047041 | 42515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

