Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein | SAMN03003324_00947 | Not Available | Negative | 1027403 - 1028839 | 53800.7 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN03003324_00948 | Not Available | Positive | 1029471 - 1029935 | 17580.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN03003324_00949 | Not Available | Negative | 1029932 - 1032388 | 91668.2 |
| dna-binding transcriptional regulator yhcf, gntr family | SAMN03003324_00950 | Not Available | Positive | 1032602 - 1033630 | 39153.4 |
| Trna-pro | Not Available | Not Available | Positive | 1033788 - 1033864 | Not Available |
| hypothetical protein | SAMN03003324_00952 | Not Available | Positive | 1034009 - 1034461 | 17031.8 |
| hypothetical protein | SAMN03003324_00953 | Not Available | Negative | 1034458 - 1035456 | 38477.4 |
| dinb superfamily protein | SAMN03003324_00954 | Not Available | Positive | 1035690 - 1036199 | 19621.2 |
| sugar phosphate isomerase/epimerase | SAMN03003324_00955 | Not Available | Negative | 1036225 - 1037127 | 34275.8 |
| arac-type dna-binding protein | SAMN03003324_00956 | Not Available | Negative | 1037153 - 1038172 | 38772.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

