Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00907 | Not Available | Negative | 976692 - 977384 | 25848.7 |
| protein of unknown function | SAMN03003324_00908 | Not Available | Positive | 977527 - 978171 | 24196.7 |
| hypothetical protein | SAMN03003324_00909 | Not Available | Positive | 978242 - 978442 | 7584.51 |
| proline iminopeptidase | SAMN03003324_00910 | Not Available | Positive | 978447 - 979403 | 36004.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN03003324_00911 | Not Available | Positive | 979561 - 980154 | 23604.3 |
| fecr family protein | SAMN03003324_00912 | Not Available | Positive | 980290 - 981333 | 39120.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00913 | Not Available | Positive | 981536 - 984826 | 122197.0 |
| starch-binding associating with outer membrane | SAMN03003324_00914 | Not Available | Positive | 984839 - 986500 | 61383.5 |
| cellulase (glycosyl hydrolase family 5) | SAMN03003324_00915 | Not Available | Positive | 986580 - 987677 | 42285.2 |
| predicted dehydrogenase | SAMN03003324_00916 | Not Available | Positive | 987813 - 989171 | 51292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

