Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00897 | Not Available | Negative | 972210 - 972413 | 7724.62 |
| hypothetical protein | SAMN03003324_00898 | Not Available | Negative | 972414 - 972581 | 6483.08 |
| hypothetical protein | SAMN03003324_00899 | Not Available | Negative | 972627 - 972860 | 8886.68 |
| regulatory protein, luxr family | SAMN03003324_00900 | Not Available | Negative | 972862 - 973122 | 9742.05 |
| hypothetical protein | SAMN03003324_00901 | Not Available | Positive | 973257 - 973889 | 23704.4 |
| hypothetical protein | SAMN03003324_00902 | Not Available | Positive | 973910 - 974221 | 12151.7 |
| hypothetical protein | SAMN03003324_00903 | Not Available | Positive | 974227 - 974499 | 10801.0 |
| helix-turn-helix | SAMN03003324_00904 | Not Available | Positive | 974501 - 974899 | 15346.6 |
| fic/doc family protein | SAMN03003324_00905 | Not Available | Positive | 975104 - 975889 | 30633.4 |
| hypothetical protein | SAMN03003324_00906 | Not Available | Positive | 976049 - 976642 | 22456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

