Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterochelin esterase | SAMN03003324_00025 | Not Available | Negative | 21565 - 22725 | 43601.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_00026 | Not Available | Positive | 22993 - 24060 | 40430.9 |
| transcriptional regulator, arac family | SAMN03003324_00027 | Not Available | Positive | 24145 - 25002 | 32799.7 |
| putative hydrolases of hd superfamily | SAMN03003324_00028 | Not Available | Negative | 25067 - 25681 | 23612.9 |
| hypothetical protein | SAMN03003324_00029 | Not Available | Positive | 25893 - 26387 | 18245.6 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN03003324_00030 | Not Available | Positive | 26471 - 26788 | 11881.0 |
| ribose-5-phosphate isomerase | SAMN03003324_00031 | Not Available | Negative | 26872 - 27564 | 25255.7 |
| peptidase family s41 | SAMN03003324_00032 | Not Available | Positive | 27711 - 29273 | 59294.1 |
| hypothetical protein | SAMN03003324_00033 | Not Available | Negative | 29406 - 30197 | 29359.2 |
| two component transcriptional regulator, lyttr family | SAMN03003324_00034 | Not Available | Negative | 30323 - 31081 | 29440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

