Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00877 | Not Available | Negative | 959776 - 960021 | 9428.6 |
| hypothetical protein | SAMN03003324_00878 | Not Available | Negative | 960092 - 960847 | 29030.9 |
| hypothetical protein | SAMN03003324_00879 | Not Available | Negative | 960849 - 961652 | 30529.1 |
| hypothetical protein | SAMN03003324_00880 | Not Available | Negative | 961807 - 962103 | 11173.5 |
| hypothetical protein | SAMN03003324_00881 | Not Available | Negative | 962247 - 962390 | 5423.67 |
| pcfj-like protein | SAMN03003324_00882 | Not Available | Negative | 962390 - 963700 | 50537.9 |
| pcfk-like protein | SAMN03003324_00883 | Not Available | Negative | 963706 - 964077 | 13913.6 |
| swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily a-like protein 1 | SAMN03003324_00884 | Not Available | Negative | 964156 - 965847 | 63831.9 |
| hypothetical protein | SAMN03003324_00885 | Not Available | Negative | 966061 - 966288 | 8022.38 |
| hypothetical protein | SAMN03003324_00886 | Not Available | Negative | 966281 - 966646 | 13487.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

