Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN03003324_00820 | Not Available | Positive | 909553 - 910710 | 43429.1 |
| hypothetical protein | SAMN03003324_00821 | Not Available | Negative | 910717 - 911223 | 19612.1 |
| sodium/proton antiporter, cpa1 family | SAMN03003324_00822 | Not Available | Positive | 911397 - 912635 | 44609.4 |
| kef-type k+ transport system, membrane component kefb | SAMN03003324_00823 | Not Available | Positive | 912702 - 914726 | 74671.8 |
| dinb superfamily protein | SAMN03003324_00824 | Not Available | Negative | 914738 - 915280 | 21090.5 |
| hypothetical protein | SAMN03003324_00825 | Not Available | Positive | 915740 - 917749 | 77117.0 |
| nad(p)h-dependent fmn reductase | SAMN03003324_00826 | Not Available | Positive | 917774 - 918319 | 20086.3 |
| Trna-ser | Not Available | Not Available | Positive | 918530 - 918616 | Not Available |
| hypothetical protein | SAMN03003324_00875 | Not Available | Negative | 958737 - 958913 | 6916.58 |
| hypothetical protein | SAMN03003324_00876 | Not Available | Negative | 958915 - 959448 | 20145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

