Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | SAMN03003324_00810 | Not Available | Negative | 897397 - 898779 | 51971.5 |
| response regulator receiver domain-containing protein | SAMN03003324_00811 | Not Available | Positive | 898898 - 899266 | 13481.5 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN03003324_00812 | Not Available | Positive | 899583 - 901706 | 81213.9 |
| hypothetical protein | SAMN03003324_00813 | Not Available | Negative | 901808 - 901987 | 6517.79 |
| hypothetical protein | SAMN03003324_00814 | Not Available | Positive | 902154 - 902471 | 11877.2 |
| hypothetical protein | SAMN03003324_00815 | Not Available | Negative | 902523 - 904118 | 60639.1 |
| membrane fusion protein, multidrug efflux system | SAMN03003324_00816 | Not Available | Negative | 904120 - 905178 | 39083.7 |
| outer membrane protein tolc | SAMN03003324_00817 | Not Available | Negative | 905180 - 906523 | 51206.8 |
| arac-type dna-binding protein | SAMN03003324_00818 | Not Available | Positive | 906589 - 907377 | 30445.0 |
| kup system potassium uptake protein | SAMN03003324_00819 | Not Available | Negative | 907374 - 909311 | 72582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

