Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN03003324_00790 | Not Available | Negative | 877924 - 878691 | 28002.6 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN03003324_00791 | Not Available | Negative | 878754 - 879044 | 11140.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN03003324_00792 | Not Available | Negative | 879041 - 879775 | 27957.1 |
| tryptophanyl-trna synthetase | SAMN03003324_00793 | Not Available | Positive | 879995 - 880993 | 37434.8 |
| deoxyadenosine/deoxycytidine kinase | SAMN03003324_00794 | Not Available | Positive | 881039 - 881653 | 23892.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN03003324_00795 | Not Available | Positive | 881702 - 882442 | 28118.4 |
| hypothetical protein | SAMN03003324_00796 | Not Available | Positive | 882490 - 883029 | 20799.8 |
| ctp synthase | SAMN03003324_00797 | Not Available | Positive | 883492 - 885108 | 59923.0 |
| yidc/oxa1 family membrane protein insertase | SAMN03003324_00798 | Not Available | Positive | 885129 - 886931 | 68395.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN03003324_00799 | Not Available | Positive | 887095 - 889935 | 106004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

