Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoesterase | SAMN03003324_00780 | Not Available | Positive | 869923 - 870558 | 24418.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN03003324_00781 | Not Available | Negative | 870559 - 871008 | 17066.2 |
| cation diffusion facilitator family transporter | SAMN03003324_00782 | Not Available | Negative | 871005 - 871982 | 35963.7 |
| aspartate aminotransferase | SAMN03003324_00783 | Not Available | Positive | 872095 - 873288 | 43617.0 |
| putative abc transport system permease protein | SAMN03003324_00784 | Not Available | Negative | 873392 - 874636 | 45817.0 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMN03003324_00785 | Not Available | Positive | 874879 - 875928 | 40070.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN03003324_00786 | Not Available | Positive | 876041 - 876724 | 25532.1 |
| hypothetical protein | SAMN03003324_00787 | Not Available | Negative | 876768 - 876926 | 5516.32 |
| protein of unknown function | SAMN03003324_00788 | Not Available | Negative | 877056 - 877277 | 8587.66 |
| cob(i)alamin adenosyltransferase | SAMN03003324_00789 | Not Available | Negative | 877362 - 877955 | 22389.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

