Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN03003324_00770 | Not Available | Negative | 854939 - 855814 | 33970.7 |
| hypothetical protein | SAMN03003324_00771 | Not Available | Negative | 855816 - 857204 | 53948.9 |
| site-specific recombinase xerd | SAMN03003324_00772 | Not Available | Negative | 857364 - 858629 | 49140.8 |
| methylglutaconyl-coa hydratase | SAMN03003324_00773 | Not Available | Positive | 858917 - 859693 | 28609.4 |
| hypothetical protein | SAMN03003324_00774 | Not Available | Positive | 859711 - 860382 | 24366.6 |
| phosphoglycerol transferase mdob | SAMN03003324_00775 | Not Available | Positive | 860444 - 862312 | 70833.8 |
| dipeptidyl-peptidase-4 | SAMN03003324_00776 | Not Available | Positive | 862333 - 864507 | 82041.7 |
| putative mrna 3-end processing factor | SAMN03003324_00777 | Not Available | Positive | 864824 - 865846 | 37806.2 |
| dna ligase-1 | SAMN03003324_00778 | Not Available | Positive | 865848 - 867440 | 60788.8 |
| atp dependent helicase, lhr family | SAMN03003324_00779 | Not Available | Positive | 867437 - 869920 | 93358.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

