Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00750 | Not Available | Negative | 841303 - 841731 | 16830.5 |
| hypothetical protein | SAMN03003324_00751 | Not Available | Negative | 841785 - 842390 | 23459.0 |
| hypothetical protein | SAMN03003324_00752 | Not Available | Negative | 842578 - 843153 | 22264.0 |
| hypothetical protein | SAMN03003324_00753 | Not Available | Negative | 843238 - 843912 | 23929.3 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN03003324_00754 | Not Available | Negative | 844023 - 844685 | 25189.9 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN03003324_00755 | Not Available | Negative | 844685 - 845452 | 29382.4 |
| hypothetical protein | SAMN03003324_00756 | Not Available | Negative | 845431 - 845967 | 20900.7 |
| hypothetical protein | SAMN03003324_00757 | Not Available | Negative | 846059 - 846385 | 12054.4 |
| methyltransferase domain-containing protein | SAMN03003324_00758 | Not Available | Negative | 846562 - 847161 | 22979.6 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN03003324_00759 | Not Available | Positive | 847434 - 847811 | 14260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

