Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteroides conjugative transposon tran protein | SAMN03003324_00740 | Not Available | Positive | 835339 - 836232 | 34046.1 |
| conjugative transposon protein trao | SAMN03003324_00741 | Not Available | Positive | 836253 - 836813 | 20870.1 |
| protein of unknown function | SAMN03003324_00742 | Not Available | Positive | 836825 - 837274 | 17420.6 |
| hypothetical protein | SAMN03003324_00743 | Not Available | Positive | 837376 - 837654 | 10716.3 |
| helix-turn-helix domain-containing protein | SAMN03003324_00744 | Not Available | Positive | 837693 - 838430 | 27890.0 |
| vcbs repeat-containing protein | SAMN03003324_00745 | Not Available | Positive | 838496 - 839038 | 20235.1 |
| helix-turn-helix domain-containing protein | SAMN03003324_00746 | Not Available | Positive | 839377 - 839688 | 12034.5 |
| helix-turn-helix domain-containing protein | SAMN03003324_00747 | Not Available | Positive | 839669 - 839968 | 11664.1 |
| hypothetical protein | SAMN03003324_00748 | Not Available | Positive | 840236 - 840493 | 9614.54 |
| response regulator receiver domain-containing protein | SAMN03003324_00749 | Not Available | Positive | 840490 - 840933 | 16554.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

