Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00730 | Not Available | Positive | 826455 - 827534 | 42246.2 |
| protein of unknown function | SAMN03003324_00731 | Not Available | Positive | 827734 - 828039 | 10523.9 |
| protein of unknown function | SAMN03003324_00732 | Not Available | Positive | 828051 - 828380 | 12390.6 |
| bacteroides conjugation system atpase, trag family | SAMN03003324_00733 | Not Available | Positive | 828377 - 830881 | 96003.6 |
| protein of unknown function | SAMN03003324_00734 | Not Available | Positive | 830909 - 831541 | 23789.7 |
| bacteroides conjugative transposon traj protein | SAMN03003324_00735 | Not Available | Positive | 831544 - 832539 | 36665.0 |
| bacteroides conjugative transposon trak protein | SAMN03003324_00736 | Not Available | Positive | 832559 - 833182 | 24204.8 |
| hypothetical protein | SAMN03003324_00737 | Not Available | Positive | 833193 - 833621 | 15752.0 |
| hypothetical protein | SAMN03003324_00738 | Not Available | Positive | 833640 - 833924 | 11180.7 |
| bacteroides conjugative transposon tram protein | SAMN03003324_00739 | Not Available | Positive | 833911 - 835251 | 49080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

