Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cxxc motif-containing protein, duf1111 family | SAMN03003324_00720 | Not Available | Positive | 818080 - 819279 | 43375.5 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN03003324_00721 | Not Available | Positive | 819281 - 819727 | 16224.6 |
| hypothetical protein | SAMN03003324_00722 | Not Available | Positive | 819720 - 820961 | 46831.8 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN03003324_00723 | Not Available | Negative | 821001 - 822287 | 48430.1 |
| hypothetical protein | SAMN03003324_00724 | Not Available | Negative | 822290 - 822727 | 16849.6 |
| cellulose biosynthesis protein bcsq | SAMN03003324_00725 | Not Available | Positive | 823412 - 824179 | 29206.5 |
| protein of unknown function | SAMN03003324_00726 | Not Available | Positive | 824192 - 824602 | 16171.8 |
| protein of unknown function | SAMN03003324_00727 | Not Available | Positive | 824602 - 824907 | 11802.1 |
| hypothetical protein | SAMN03003324_00728 | Not Available | Positive | 824920 - 825555 | 23804.2 |
| hypothetical protein | SAMN03003324_00729 | Not Available | Positive | 825603 - 826427 | 31794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

