Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase conserved c-terminal domain-containing protein | SAMN03003324_00710 | Not Available | Positive | 803202 - 808619 | 204380.0 |
| hypothetical protein | SAMN03003324_00711 | Not Available | Positive | 808864 - 809058 | 7385.21 |
| arsenite transporter, acr3 family | SAMN03003324_00712 | Not Available | Negative | 809752 - 810909 | 42826.7 |
| hypothetical protein | SAMN03003324_00713 | Not Available | Negative | 810982 - 811434 | 16813.2 |
| merr family transcriptional regulator, mercuric resistance operon regulatory protein | SAMN03003324_00714 | Not Available | Positive | 811524 - 811931 | 15485.8 |
| transcriptional regulator, hxlr family | SAMN03003324_00715 | Not Available | Negative | 812002 - 812358 | 13590.9 |
| hypothetical protein | SAMN03003324_00716 | Not Available | Positive | 812449 - 812838 | 14210.9 |
| high-affinity iron transporter | SAMN03003324_00717 | Not Available | Negative | 812935 - 814830 | 70940.2 |
| type iv secretory pathway, vird4 component, trag/trad family atpase | SAMN03003324_00718 | Not Available | Negative | 815092 - 817092 | 75996.7 |
| iron (metal) dependent repressor, dtxr family | SAMN03003324_00719 | Not Available | Negative | 817214 - 817882 | 25228.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

