Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cd2+/zn2+-exporting atpase | SAMN03003324_00680 | Not Available | Positive | 771355 - 773391 | 74152.1 |
| atp cone domain-containing protein | SAMN03003324_00681 | Not Available | Positive | 773455 - 774306 | 32179.2 |
| predicted atpase | SAMN03003324_00682 | Not Available | Positive | 774315 - 774863 | 21288.7 |
| pap2 superfamily protein | SAMN03003324_00683 | Not Available | Positive | 774889 - 775659 | 28320.5 |
| rtec protein | SAMN03003324_00684 | Not Available | Positive | 776004 - 776834 | 32910.4 |
| hypothetical protein | SAMN03003324_00685 | Not Available | Positive | 776937 - 777134 | 8126.96 |
| iron complex outermembrane recepter protein | SAMN03003324_00686 | Not Available | Negative | 777260 - 779236 | 74058.5 |
| hypothetical protein | SAMN03003324_00687 | Not Available | Negative | 779340 - 780185 | 31623.0 |
| hypothetical protein | SAMN03003324_00688 | Not Available | Negative | 780416 - 780892 | 18733.0 |
| rtec protein | SAMN03003324_00689 | Not Available | Positive | 781215 - 782060 | 33178.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

