Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00670 | Not Available | Positive | 756415 - 758466 | 77593.5 |
| competence protein comec | SAMN03003324_00671 | Not Available | Positive | 758654 - 760237 | 60115.2 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03003324_00672 | Not Available | Positive | 761089 - 765411 | 159664.0 |
| rnd family efflux transporter, mfp subunit | SAMN03003324_00673 | Not Available | Positive | 765418 - 766761 | 48158.1 |
| hd domain-containing protein | SAMN03003324_00674 | Not Available | Positive | 766782 - 767363 | 22399.7 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN03003324_00675 | Not Available | Positive | 767411 - 768151 | 28487.1 |
| putative membrane protein | SAMN03003324_00676 | Not Available | Positive | 768253 - 769134 | 33288.9 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN03003324_00677 | Not Available | Positive | 769167 - 769631 | 16552.5 |
| hypothetical protein | SAMN03003324_00678 | Not Available | Positive | 769618 - 770592 | 37770.1 |
| hypothetical protein | SAMN03003324_00679 | Not Available | Positive | 770598 - 771278 | 26383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

