Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein, cic family | SAMN03003324_00660 | Not Available | Negative | 743747 - 745537 | 65590.2 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN03003324_00661 | Not Available | Negative | 745548 - 746270 | 27565.4 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN03003324_00662 | Not Available | Negative | 746342 - 747031 | 26029.7 |
| peroxiredoxin | SAMN03003324_00663 | Not Available | Negative | 747136 - 748266 | 42430.6 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN03003324_00664 | Not Available | Negative | 748414 - 749877 | 53910.5 |
| hypothetical protein | SAMN03003324_00665 | Not Available | Positive | 750027 - 750551 | 20870.5 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN03003324_00666 | Not Available | Positive | 750672 - 751094 | 15825.2 |
| cd2+/zn2+-exporting atpase | SAMN03003324_00667 | Not Available | Positive | 751158 - 753128 | 70765.5 |
| alanyl-trna synthetase | SAMN03003324_00668 | Not Available | Negative | 753181 - 755880 | 101729.0 |
| transcriptional regulator | SAMN03003324_00669 | Not Available | Positive | 756039 - 756332 | 11224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

