Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase | SAMN03003324_00639 | Not Available | Negative | 723363 - 724772 | 51388.0 |
| dihydroneopterin aldolase | SAMN03003324_00640 | Not Available | Negative | 724793 - 725164 | 13985.0 |
| glutaryl-coa dehydrogenase | SAMN03003324_00641 | Not Available | Positive | 725302 - 726492 | 43722.9 |
| activator of hsp90 atpase homolog 1-like protein | SAMN03003324_00642 | Not Available | Positive | 726558 - 726941 | 14698.0 |
| hypothetical protein | SAMN03003324_00643 | Not Available | Positive | 726960 - 727175 | 7638.57 |
| diaminopimelate decarboxylase | SAMN03003324_00644 | Not Available | Negative | 727702 - 728859 | 43079.2 |
| aspartate kinase | SAMN03003324_00645 | Not Available | Negative | 729041 - 730354 | 48511.6 |
| phosphoglucomutase | SAMN03003324_00646 | Not Available | Positive | 730608 - 732341 | 63472.5 |
| transcriptional regulator, laci family | SAMN03003324_00647 | Not Available | Negative | 732410 - 733423 | 37511.6 |
| curved dna-binding protein | SAMN03003324_00648 | Not Available | Positive | 733708 - 734643 | 33742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

