Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00005 | Not Available | Positive | 2557 - 2736 | 7026.63 |
| hypothetical protein | SAMN03003324_00006 | Not Available | Positive | 2742 - 3221 | 18514.1 |
| transcriptional regulator, hxlr family | SAMN03003324_00007 | Not Available | Negative | 3462 - 3827 | 13945.2 |
| luciferase family oxidoreductase, group 1 | SAMN03003324_00008 | Not Available | Negative | 3864 - 4877 | 37243.2 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN03003324_00009 | Not Available | Negative | 4992 - 6116 | 42494.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN03003324_00010 | Not Available | Positive | 6398 - 7216 | 29287.0 |
| arac-type dna-binding protein | SAMN03003324_00011 | Not Available | Positive | 7244 - 8176 | 36058.3 |
| hypothetical protein | SAMN03003324_00012 | Not Available | Positive | 8526 - 8882 | 13612.5 |
| protein of unknown function | SAMN03003324_00013 | Not Available | Positive | 8879 - 9883 | 39159.5 |
| predicted dehydrogenase | SAMN03003324_00014 | Not Available | Positive | 10458 - 11789 | 49455.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

