Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00619 | Not Available | Negative | 703247 - 703567 | 12014.9 |
| hypothetical protein | SAMN03003324_00620 | Not Available | Negative | 704113 - 705078 | 37071.0 |
| hypothetical protein | SAMN03003324_00621 | Not Available | Negative | 705169 - 705597 | 16593.8 |
| transcriptional regulator, alpa family | SAMN03003324_00622 | Not Available | Negative | 705588 - 705887 | 11366.7 |
| hypothetical protein | SAMN03003324_00623 | Not Available | Negative | 706005 - 707144 | 45142.8 |
| site-specific recombinase xerd | SAMN03003324_00624 | Not Available | Negative | 707144 - 708253 | 42706.1 |
| trna modification gtpase trme | SAMN03003324_00625 | Not Available | Negative | 708547 - 709917 | 49674.6 |
| predicted purr-regulated permease perm | SAMN03003324_00626 | Not Available | Positive | 710016 - 711140 | 41425.0 |
| hypothetical protein | SAMN03003324_00627 | Not Available | Negative | 711303 - 712076 | 28678.7 |
| regulatory protein, luxr family | SAMN03003324_00628 | Not Available | Positive | 712181 - 712957 | 29069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

