Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf262 | SAMN03003324_00609 | Not Available | Negative | 692632 - 693774 | 43984.0 |
| dna (cytosine-5)-methyltransferase 1 | SAMN03003324_00610 | Not Available | Negative | 693771 - 694844 | 40574.4 |
| ftsk/spoiiie family protein | SAMN03003324_00611 | Not Available | Positive | 695109 - 696326 | 46041.3 |
| pld-like domain-containing protein | SAMN03003324_00612 | Not Available | Negative | 696664 - 697785 | 42831.6 |
| hypothetical protein | SAMN03003324_00613 | Not Available | Negative | 697884 - 698216 | 12970.6 |
| protein of unknown function | SAMN03003324_00614 | Not Available | Negative | 698386 - 700386 | 76264.4 |
| hypothetical protein | SAMN03003324_00615 | Not Available | Negative | 700386 - 700889 | 19027.8 |
| hypothetical protein | SAMN03003324_00616 | Not Available | Negative | 700882 - 702045 | 45000.6 |
| hypothetical protein | SAMN03003324_00617 | Not Available | Negative | 702189 - 702695 | 18568.2 |
| hypothetical protein | SAMN03003324_00618 | Not Available | Negative | 702701 - 703165 | 17559.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

