Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00589 | Not Available | Negative | 673296 - 674162 | 32019.9 |
| cytochrome c peroxidase | SAMN03003324_00590 | Not Available | Negative | 674155 - 675240 | 40085.5 |
| hypothetical protein | SAMN03003324_00591 | Not Available | Negative | 675245 - 676042 | 28815.2 |
| hypothetical protein | SAMN03003324_00592 | Not Available | Negative | 676230 - 676619 | 15420.6 |
| hypothetical protein | SAMN03003324_00593 | Not Available | Positive | 677139 - 677903 | 28581.0 |
| hypothetical protein | SAMN03003324_00594 | Not Available | Positive | 677912 - 678745 | 31546.3 |
| transcriptional regulator, alpa family | SAMN03003324_00595 | Not Available | Positive | 679168 - 679515 | 13603.6 |
| phage integrase family protein | SAMN03003324_00596 | Not Available | Negative | 679677 - 680213 | 20542.9 |
| phage integrase sam-like domain-containing protein | SAMN03003324_00597 | Not Available | Negative | 680354 - 680788 | 17006.4 |
| dna binding domain-containing protein, excisionase family | SAMN03003324_00598 | Not Available | Negative | 680807 - 681373 | 21680.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

