Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00579 | Not Available | Negative | 666840 - 667232 | 14671.8 |
| arac-type dna-binding protein | SAMN03003324_00580 | Not Available | Negative | 667277 - 668143 | 33565.5 |
| hypothetical protein | SAMN03003324_00581 | Not Available | Negative | 668173 - 668490 | 12039.7 |
| protein sco1/2 | SAMN03003324_00582 | Not Available | Negative | 668556 - 669182 | 23683.3 |
| yhs domain-containing protein | SAMN03003324_00583 | Not Available | Negative | 669191 - 669484 | 10970.8 |
| dj-1/pfpi family protein | SAMN03003324_00584 | Not Available | Negative | 669490 - 670191 | 25274.9 |
| protein sco1/2 | SAMN03003324_00585 | Not Available | Negative | 670188 - 670820 | 24092.1 |
| hypothetical protein | SAMN03003324_00586 | Not Available | Negative | 670820 - 671254 | 16314.8 |
| hypothetical protein | SAMN03003324_00587 | Not Available | Negative | 671315 - 672226 | 33363.8 |
| cytochrome c peroxidase | SAMN03003324_00588 | Not Available | Negative | 672244 - 673290 | 39363.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

