Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| linoleoyl-coa desaturase | SAMN03003324_00569 | Not Available | Negative | 655354 - 656460 | 42129.9 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN03003324_00570 | Not Available | Positive | 656807 - 658090 | 46498.9 |
| uncharacterized conserved protein yurz, alkylhydroperoxidase/carboxymuconolactone decarboxylase family | SAMN03003324_00571 | Not Available | Negative | 658149 - 659210 | 39344.1 |
| hypothetical protein | SAMN03003324_00572 | Not Available | Positive | 659583 - 659822 | 8989.06 |
| hypothetical protein | SAMN03003324_00573 | Not Available | Negative | 660036 - 660248 | 8135.44 |
| hypothetical protein | SAMN03003324_00574 | Not Available | Negative | 660248 - 660421 | 6464.52 |
| wyl domain-containing protein | SAMN03003324_00575 | Not Available | Positive | 660438 - 660896 | 17753.5 |
| hypothetical protein | SAMN03003324_00576 | Not Available | Negative | 661973 - 662635 | 25284.4 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN03003324_00577 | Not Available | Negative | 662922 - 663893 | 35494.3 |
| iron complex outermembrane recepter protein | SAMN03003324_00578 | Not Available | Negative | 663903 - 666347 | 91375.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

