Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN03003324_00548 | Not Available | Negative | 631321 - 632436 | 41778.8 |
| arac-type dna-binding protein | SAMN03003324_00549 | Not Available | Negative | 632512 - 633498 | 37404.9 |
| hypothetical protein | SAMN03003324_00550 | Not Available | Positive | 633997 - 634350 | 12925.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN03003324_00551 | Not Available | Negative | 634382 - 635695 | 50660.1 |
| susd family protein | SAMN03003324_00552 | Not Available | Negative | 635685 - 637130 | 53913.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00553 | Not Available | Negative | 637133 - 640129 | 108896.0 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN03003324_00554 | Not Available | Positive | 640903 - 641541 | 24179.9 |
| hypothetical protein | SAMN03003324_00555 | Not Available | Positive | 641538 - 641693 | 5797.91 |
| glutamate dehydrogenase (nadp+) | SAMN03003324_00556 | Not Available | Negative | 641756 - 643096 | 48992.8 |
| rieske | SAMN03003324_00557 | Not Available | Negative | 643677 - 645221 | 56254.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

