Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 1 - 80 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 5 - 1557 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 169 - 1424 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 179 - 290 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 185 - 296 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 190 - 301 | 18.01 |
| taqi-like c-terminal specificity domain-containing protein | SAMN03003324_00002 | Not Available | Negative | 378 - 1094 | 28214.6 |
| hypothetical protein | SAMN03003324_00003 | Not Available | Negative | 1036 - 1371 | 12981.7 |
| site-specific dna recombinase | SAMN03003324_00004 | Not Available | Positive | 1568 - 2164 | 22603.8 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1821 - 1932 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

