Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00528 | Not Available | Negative | 608776 - 609705 | 35165.7 |
| two-component system, ompr family, sensor histidine kinase vick | SAMN03003324_00529 | Not Available | Negative | 609796 - 610857 | 39801.9 |
| response regulator receiver domain-containing protein | SAMN03003324_00530 | Not Available | Negative | 610897 - 611238 | 12583.3 |
| pas domain s-box-containing protein | SAMN03003324_00531 | Not Available | Negative | 611246 - 612784 | 58585.5 |
| acyl dehydratase | SAMN03003324_00532 | Not Available | Negative | 612904 - 613362 | 17544.3 |
| hypothetical protein | SAMN03003324_00533 | Not Available | Negative | 613545 - 613895 | 13600.5 |
| predicted dehydrogenase | SAMN03003324_00534 | Not Available | Negative | 613904 - 615022 | 41074.8 |
| alpha-1,2-mannosidase, putative | SAMN03003324_00535 | Not Available | Negative | 615151 - 617379 | 83441.9 |
| uncharacterized conserved protein yect, duf1311 family | SAMN03003324_00536 | Not Available | Positive | 617674 - 618099 | 15894.2 |
| drug resistance transporter, emrb/qaca subfamily | SAMN03003324_00537 | Not Available | Negative | 618265 - 619539 | 46473.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

