Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-like | SAMN03003324_00517 | Not Available | Negative | 595124 - 596050 | 34886.1 |
| peptidase family s41 | SAMN03003324_00518 | Not Available | Negative | 596097 - 597485 | 51664.8 |
| fimbrillin-like | SAMN03003324_00519 | Not Available | Negative | 597700 - 599403 | 59869.2 |
| hypothetical protein | SAMN03003324_00520 | Not Available | Negative | 599434 - 599709 | 9932.82 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN03003324_00521 | Not Available | Positive | 600171 - 603374 | 117490.0 |
| hypothetical protein | SAMN03003324_00522 | Not Available | Positive | 603747 - 604589 | 30454.3 |
| putative membrane protein | SAMN03003324_00523 | Not Available | Negative | 604615 - 605508 | 34248.9 |
| protein of unknown function | SAMN03003324_00524 | Not Available | Negative | 605769 - 606872 | 39931.3 |
| hypothetical protein | SAMN03003324_00525 | Not Available | Negative | 606888 - 607829 | 34234.1 |
| nucleotide-binding universal stress protein, uspa family | SAMN03003324_00527 | Not Available | Positive | 608285 - 608761 | 17663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

