Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_00507 | Not Available | Negative | 584718 - 585713 | 38583.7 |
| acyltransferase family protein | SAMN03003324_00508 | Not Available | Negative | 585719 - 586816 | 42135.1 |
| core-2/i-branching enzyme | SAMN03003324_00509 | Not Available | Negative | 586809 - 587681 | 34776.8 |
| core-2/i-branching enzyme | SAMN03003324_00510 | Not Available | Negative | 587678 - 588535 | 33614.6 |
| lipopolysaccharide biosynthesis protein, lps:glycosyltransferase | SAMN03003324_00511 | Not Available | Negative | 588537 - 589481 | 36691.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_00512 | Not Available | Negative | 589560 - 590483 | 36021.4 |
| polysaccharide pyruvyl transferase | SAMN03003324_00513 | Not Available | Negative | 590505 - 591386 | 34181.5 |
| na+-driven multidrug efflux pump | SAMN03003324_00514 | Not Available | Negative | 591394 - 592923 | 57438.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN03003324_00515 | Not Available | Negative | 592928 - 593887 | 35858.3 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN03003324_00516 | Not Available | Negative | 593909 - 595069 | 43410.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

