Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00497 | Not Available | Negative | 574582 - 575556 | 36925.3 |
| abc-type bacteriocin/lantibiotic exporter, contains an n-terminal double-glycine peptidase domain | SAMN03003324_00498 | Not Available | Negative | 575568 - 577193 | 61905.2 |
| uncharacterised nucleotidyltransferase | SAMN03003324_00499 | Not Available | Negative | 577197 - 578294 | 42609.9 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN03003324_00500 | Not Available | Negative | 578284 - 578568 | 10733.9 |
| peptidase s24-like | SAMN03003324_00501 | Not Available | Negative | 578594 - 579031 | 16735.8 |
| rhamnosyl/mannosyltransferase | SAMN03003324_00502 | Not Available | Negative | 579124 - 580245 | 41997.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN03003324_00503 | Not Available | Negative | 580223 - 581170 | 36570.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_00504 | Not Available | Negative | 581188 - 582312 | 43250.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_00505 | Not Available | Negative | 582306 - 583463 | 43830.1 |
| hypothetical protein | SAMN03003324_00506 | Not Available | Negative | 583429 - 584712 | 48974.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

