Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine/adenosine deaminase | SAMN03003324_00487 | Not Available | Negative | 564822 - 566168 | 49480.2 |
| arac-type dna-binding protein | SAMN03003324_00488 | Not Available | Negative | 566250 - 567098 | 32872.6 |
| ferritin-like metal-binding protein ycie | SAMN03003324_00489 | Not Available | Positive | 567322 - 567819 | 18788.7 |
| hypothetical protein | SAMN03003324_00490 | Not Available | Positive | 567897 - 568049 | 5353.05 |
| hypothetical protein | SAMN03003324_00491 | Not Available | Negative | 568209 - 568580 | 13950.8 |
| hypothetical protein | SAMN03003324_00492 | Not Available | Positive | 568776 - 569522 | 27691.0 |
| hypothetical protein | SAMN03003324_00493 | Not Available | Negative | 569553 - 569981 | 15828.0 |
| outer membrane protein ompa | SAMN03003324_00494 | Not Available | Negative | 570121 - 571314 | 44113.6 |
| capsular exopolysaccharide family | SAMN03003324_00495 | Not Available | Negative | 571387 - 573771 | 89711.1 |
| polysaccharide export outer membrane protein | SAMN03003324_00496 | Not Available | Negative | 573777 - 574571 | 29173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

