Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00476 | Not Available | Negative | 550337 - 550564 | 8863.79 |
| hexosaminidase | SAMN03003324_00477 | Not Available | Positive | 550798 - 553293 | 93118.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN03003324_00478 | Not Available | Negative | 553337 - 555745 | 90189.2 |
| elongation factor p | SAMN03003324_00479 | Not Available | Positive | 555924 - 556484 | 20859.9 |
| starch-binding associating with outer membrane | SAMN03003324_00480 | Not Available | Negative | 556581 - 558014 | 52912.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00481 | Not Available | Negative | 558025 - 561198 | 114007.0 |
| hypothetical protein | SAMN03003324_00483 | Not Available | Positive | 561742 - 561975 | 8846.9 |
| hypothetical protein | SAMN03003324_00484 | Not Available | Negative | 561994 - 562545 | 21405.0 |
| hypothetical protein | SAMN03003324_00485 | Not Available | Positive | 562909 - 563481 | 22066.0 |
| predicted arabinose efflux permease, mfs family | SAMN03003324_00486 | Not Available | Negative | 563628 - 564818 | 42901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

