Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/proline transport system permease protein | SAMN03003324_00446 | Not Available | Positive | 516959 - 517789 | 29960.2 |
| glycine betaine/proline transport system substrate-binding protein | SAMN03003324_00447 | Not Available | Positive | 517808 - 518674 | 31417.9 |
| hypothetical protein | SAMN03003324_00448 | Not Available | Negative | 518746 - 519240 | 19092.5 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN03003324_00449 | Not Available | Negative | 519336 - 521489 | 79961.8 |
| hypothetical protein | SAMN03003324_00450 | Not Available | Positive | 521694 - 522524 | 30085.3 |
| signal peptidase ii | SAMN03003324_00451 | Not Available | Negative | 522575 - 523069 | 18466.5 |
| uncharacterized membrane protein yccf, duf307 family | SAMN03003324_00452 | Not Available | Positive | 523172 - 523540 | 13463.2 |
| protein of unknown function | SAMN03003324_00453 | Not Available | Positive | 523621 - 524223 | 21625.4 |
| hypothetical protein | SAMN03003324_00454 | Not Available | Negative | 524326 - 524556 | 8652.5 |
| alkylated dna repair dioxygenase alkb | SAMN03003324_00455 | Not Available | Negative | 524656 - 525270 | 23719.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

