Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00437 | Not Available | Negative | 504050 - 504223 | 6851.43 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00438 | Not Available | Positive | 504469 - 507555 | 112932.0 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 506472 - 506583 | 18.01 |
| susd family protein | SAMN03003324_00439 | Not Available | Positive | 507578 - 509083 | 55902.7 |
| putative membrane protein | SAMN03003324_00440 | Not Available | Positive | 509242 - 509829 | 20970.1 |
| hypothetical protein | SAMN03003324_00441 | Not Available | Negative | 509901 - 510413 | 18697.6 |
| phosphoribosylformylglycinamidine synthase | SAMN03003324_00442 | Not Available | Negative | 510424 - 514083 | 133483.0 |
| hypothetical protein | SAMN03003324_00443 | Not Available | Negative | 514106 - 514276 | 6636.22 |
| hypothetical protein | SAMN03003324_00444 | Not Available | Positive | 514534 - 515709 | 44408.5 |
| glycine betaine/proline transport system atp-binding protein | SAMN03003324_00445 | Not Available | Positive | 515724 - 516962 | 45554.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

