Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00867 | Not Available | Positive | 953965 - 954555 | 22798.6 |
| Helix-turn-helix dna binding protein | SAMN03003324_00868 | Not Available | Negative | 954524 - 955015 | 19189.3 |
| hypothetical protein | SAMN03003324_00869 | Not Available | Negative | 955194 - 955385 | 7172.7 |
| hypothetical protein | SAMN03003324_00870 | Not Available | Negative | 955704 - 955856 | 5780.02 |
| hypothetical protein | SAMN03003324_00871 | Not Available | Negative | 955861 - 956070 | 7795.26 |
| Hypothetical protein | SAMN03003324_00872 | Not Available | Positive | 956975 - 957271 | 11446.8 |
| Transcriptional regulator | SAMN03003324_00873 | Not Available | Positive | 957302 - 957694 | 15025.3 |
| Attr | Not Available | Not Available | Positive | 957386 - 957397 | Not Available |
| Putative modification methylase dpniia | SAMN03003324_00874 | Not Available | Negative | 957737 - 958648 | 35059.9 |
| taqi-like c-terminal specificity domain-containing protein | SAMN03003324_00001 | Not Available | Positive | 1 - 394 | 15295.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

