Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_00426 | Not Available | Negative | 492732 - 493337 | 23579.3 |
| hypothetical protein | SAMN03003324_00427 | Not Available | Positive | 493544 - 494587 | 40945.0 |
| dipeptidase e | SAMN03003324_00428 | Not Available | Positive | 494607 - 495314 | 26094.2 |
| hypothetical protein | SAMN03003324_00429 | Not Available | Negative | 495322 - 496272 | 34559.2 |
| hypothetical protein | SAMN03003324_00430 | Not Available | Negative | 496285 - 497451 | 42462.7 |
| hypothetical protein | SAMN03003324_00431 | Not Available | Negative | 497400 - 498374 | 36450.4 |
| outer membrane cobalamin receptor protein | SAMN03003324_00432 | Not Available | Negative | 498541 - 500625 | 79912.7 |
| doxx-like family protein | SAMN03003324_00434 | Not Available | Positive | 501139 - 501519 | 14057.7 |
| cytosine/adenosine deaminase | SAMN03003324_00435 | Not Available | Negative | 501567 - 502886 | 48380.7 |
| protein of unknown function | SAMN03003324_00436 | Not Available | Negative | 503017 - 503991 | 34952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

