Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-terminal double-transmembrane domain-containing protein | SAMN03003324_00416 | Not Available | Negative | 474014 - 475444 | 53455.6 |
| protein of unknown function duf58 | SAMN03003324_00417 | Not Available | Negative | 475446 - 476333 | 34252.1 |
| moxr-like atpase | SAMN03003324_00418 | Not Available | Negative | 476333 - 477331 | 37013.3 |
| protein of unknown function | SAMN03003324_00419 | Not Available | Positive | 477465 - 478112 | 24946.4 |
| starch-binding associating with outer membrane | SAMN03003324_00420 | Not Available | Negative | 478186 - 479634 | 52350.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00421 | Not Available | Negative | 479688 - 483185 | 127159.0 |
| zinc carboxypeptidase | SAMN03003324_00422 | Not Available | Negative | 483404 - 486145 | 101307.0 |
| susd family protein | SAMN03003324_00423 | Not Available | Negative | 486164 - 487675 | 54718.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00424 | Not Available | Negative | 487717 - 491232 | 127370.0 |
| fecr family protein | SAMN03003324_00425 | Not Available | Negative | 491346 - 492656 | 48606.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

