Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 2, sugar binding domain | SAMN03003324_00406 | Not Available | Negative | 451500 - 454784 | 121983.0 |
| alpha-l-rhamnosidase | SAMN03003324_00407 | Not Available | Negative | 454847 - 457615 | 102814.0 |
| starch-binding associating with outer membrane | SAMN03003324_00408 | Not Available | Negative | 457632 - 459146 | 56246.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00409 | Not Available | Negative | 459157 - 462285 | 113370.0 |
| alpha-l-rhamnosidase | SAMN03003324_00410 | Not Available | Negative | 462434 - 465106 | 100434.0 |
| tldd protein | SAMN03003324_00411 | Not Available | Negative | 465292 - 466932 | 59944.2 |
| predicted zn-dependent protease or its inactivated homolog | SAMN03003324_00412 | Not Available | Negative | 467020 - 468336 | 47834.0 |
| tldd protein | SAMN03003324_00413 | Not Available | Negative | 468339 - 469973 | 59948.0 |
| hypothetical protein | SAMN03003324_00414 | Not Available | Negative | 470062 - 471858 | 67350.4 |
| hypothetical protein | SAMN03003324_00415 | Not Available | Negative | 471859 - 474021 | 81104.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

