Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00396 | Not Available | Positive | 439189 - 439836 | 24309.3 |
| l-lactate dehydrogenase complex protein lldg | SAMN03003324_00397 | Not Available | Negative | 439825 - 440448 | 22537.1 |
| l-lactate dehydrogenase complex protein lldf | SAMN03003324_00398 | Not Available | Negative | 440469 - 441848 | 51412.8 |
| l-lactate dehydrogenase complex protein llde | SAMN03003324_00399 | Not Available | Negative | 441848 - 442603 | 27790.8 |
| sugar (pentulose or hexulose) kinase | SAMN03003324_00400 | Not Available | Negative | 442607 - 444001 | 53232.5 |
| l-rhamnose isomerase / sugar isomerase | SAMN03003324_00401 | Not Available | Negative | 444001 - 445275 | 47248.8 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN03003324_00402 | Not Available | Negative | 445312 - 447432 | 77289.2 |
| l-rhamnose-h+ transport protein | SAMN03003324_00403 | Not Available | Negative | 447456 - 448532 | 39104.2 |
| dna-binding transcriptional regulator, gntr family | SAMN03003324_00404 | Not Available | Negative | 448627 - 449658 | 39135.7 |
| alpha-l-rhamnosidase | SAMN03003324_00405 | Not Available | Negative | 449712 - 451472 | 65696.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

