Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prc-barrel domain-containing protein | SAMN03003324_00386 | Not Available | Negative | 424618 - 425109 | 18470.8 |
| hypothetical protein | SAMN03003324_00387 | Not Available | Positive | 425254 - 425682 | 16290.4 |
| nucleotidyl transferase of unknown function | SAMN03003324_00388 | Not Available | Negative | 426031 - 426525 | 18626.4 |
| hypothetical protein | SAMN03003324_00389 | Not Available | Negative | 426522 - 426953 | 16801.6 |
| l-arabinose isomerase | SAMN03003324_00390 | Not Available | Negative | 427145 - 428578 | 52381.7 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN03003324_00391 | Not Available | Negative | 428584 - 431610 | 112574.0 |
| starch-binding associating with outer membrane | SAMN03003324_00392 | Not Available | Negative | 431635 - 433143 | 56638.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00393 | Not Available | Negative | 433176 - 436268 | 113165.0 |
| arac-type dna-binding protein | SAMN03003324_00394 | Not Available | Positive | 436581 - 437471 | 33986.6 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN03003324_00395 | Not Available | Negative | 437512 - 438885 | 49474.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

