Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase c | SAMN03003324_00366 | Not Available | Negative | 397910 - 398590 | 25839.8 |
| protein of unknown function | SAMN03003324_00367 | Not Available | Negative | 398619 - 399461 | 31933.7 |
| hypothetical protein | SAMN03003324_00368 | Not Available | Negative | 399469 - 401760 | 87596.7 |
| hypothetical protein | SAMN03003324_00369 | Not Available | Negative | 401723 - 402766 | 39997.2 |
| d-methionine transport system substrate-binding protein | SAMN03003324_00370 | Not Available | Negative | 402767 - 403585 | 29630.6 |
| d-methionine transport system permease protein | SAMN03003324_00371 | Not Available | Negative | 403651 - 404310 | 23816.1 |
| d-methionine transport system atp-binding protein | SAMN03003324_00372 | Not Available | Negative | 404303 - 405340 | 37825.1 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN03003324_00373 | Not Available | Negative | 405440 - 406573 | 41020.8 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03003324_00374 | Not Available | Negative | 406587 - 410960 | 160464.0 |
| hypothetical protein | SAMN03003324_00375 | Not Available | Negative | 411070 - 411447 | 14742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

