Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylhistidine n-methyltransferase | SAMN03003324_00356 | Not Available | Negative | 386350 - 387288 | 35948.7 |
| ergothioneine biosynthesis protein egtb | SAMN03003324_00357 | Not Available | Negative | 387292 - 388437 | 44404.0 |
| osmoprotectant transport system permease protein | SAMN03003324_00358 | Not Available | Negative | 388442 - 390022 | 57803.1 |
| osmoprotectant transport system atp-binding protein | SAMN03003324_00359 | Not Available | Negative | 390024 - 390908 | 33300.4 |
| dihydrolipoamide dehydrogenase | SAMN03003324_00360 | Not Available | Negative | 390912 - 392291 | 50193.1 |
| transcriptional regulator, arac family | SAMN03003324_00361 | Not Available | Negative | 392455 - 393021 | 21419.1 |
| heavy-metal-associated domain-containing protein | SAMN03003324_00362 | Not Available | Negative | 393023 - 393235 | 7520.97 |
| cu2+-exporting atpase | SAMN03003324_00363 | Not Available | Negative | 393247 - 395478 | 79738.0 |
| glycerophosphoryl diester phosphodiesterase | SAMN03003324_00364 | Not Available | Positive | 395682 - 396710 | 37967.8 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN03003324_00365 | Not Available | Negative | 396809 - 397855 | 38096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

